- Deep Sea Fauna
- Environmental Variability
- Consequences of DWHOS
- Student Research
- DEEPEND Publications
Deepesh Tourani Thesis Defense - Inferred Function and Dynamics of Microbial Communities from Northern Gulf of Mexico
As part of the DEEPEND Consortium, our laboratory has been characterizing the microbial community composition and structure in the northern Gulf of Mexico (NGoM) pelagic waters using modern molecular ecology methods. We had previously sequenced a large cache of 16S rRNA gene data, which included 466 samples from two cruises in 2016 (May: DP03, August: DP04). To enhance taxonomic identifications, Mr. Tourani's MS thesis in Jose Lopez's laboratory at Nova Southeastern University has taken the same baseline 16S data and transformed it to infer the potential functions of the midwater microbiomes across time and space. The Phylogenetic Investigation of Communities by Reconstruction of Unobserved States (PICRUSt) approach was used for predicting biomolecular function based on the KEGG metabolic database. Strong depth stratification of metabolic function was observed (p<0.001), with a major shift in function between euphotic zone and aphotic zone, associated with a major differential abundance of photosynthetic functional signatures. Temporal analyses showed photosynthetic primary productivity was significantly different across season but not year, which may be attributed to high seasonal outflow of the Mississippi river.
Grad Student Pruzinsky Uses Morphological Patterns to ID Young Tuna for Population Assessments
"The Deepwater Horizon oil spill overlapped with the spawning activities of many ecologically and economically important tuna species. However, the significant knowledge gap regarding early life stage tuna taxonomy and distribution makes it difficult to understand how the spill may have affected them.
As a graduate student, Nina Pruzinsky examined the abundance, distribution, and morphological characteristics of larval and juvenile tunas (Scombridae) and identified primary drivers of their distribution to help fill this gap and inform future management and conservation efforts.
Nina, who recently completed her graduate studies, was a master’s student in Nova Southeastern University’s Department of Marine and Environmental Sciences and a GoMRI Scholar with the Deep-Pelagic Nekton Dynamics of the Gulf of Mexico (DEEPEND) Consortium.
The GoMRI community embraces bright and dedicated students like Nina Pruzinsky and their important contributions. The GoMRI Scholars Program recognizes graduate students whose work focuses on GoMRI-funded projects and builds community for the next generation of ocean science professionals."
Her story can be found by clicking this link.
Congratulations Nina from the entire DEEPEND team!!
DEEPEND Photo Featured on Cover of Science Magazine
The DEEPEND Consortium just had an image from their field work make the cover of one of the most significant scientific journals in the world - Science. Dr. Fenolio took the image during one of the research cruises out on the Gulf of Mexico. The deep-sea fish featured on the cover possesses highly modified eyes and the article in the journal depicts how some deep-sea fishes can see in color (it was thought they were color-blind, only seeing shades of blue). More on the fish featured on the cover: This fish, the tube-eye (Stylephorus chordatus), is known from tropical and subtropical waters across the world’s oceans. One hypothesis explaining the strange binocular eyes is that the structures serve as an adaptation helping these fish detect faint bioluminescence in the dark depths of the oceans - where this species is found. The light these animals might be looking for would be produced by small crustaceans (copepods) that they target as food items. Remotely operated vehicles and subs documenting the deep-sea fauna have captured this species oriented vertically in the water column. It is also believed that this species is part of the “deep scattering layer” (DSL) – a community of marine organisms that migrate from deeper waters toward the surface every night, where they feed in the productive epipelagic zone under the cover of darkness. At dawn, the DSL heads back down to deeper and darker waters. Interestingly, this DSL represents the largest migration of wildlife on Earth and said migration takes place every day. One other oddity involving the DSL, it is entirely reliant on ambient light conditions to begin their movements toward and away from the ocean’s surface. During an eclipse of the sun, the DSL was documented to start moving toward the surface!
DEEPEND participates in a historic expedition: video of a live giant squid in the Gulf of Mexico!
Dr. Edie Widder did it again! With her colleague, Dr. Nathan Robinson, Edie used her MEDUSA camera platform to capture video of a live giant squid deep in the Gulf of Mexico during a recent NOAA Ocean Exploration and Research-supported cruise. This is the first recording of a live giant squid in the Gulf of Mexico (Atlantic Ocean, for that matter), and only the second such filming ever. Of course, the first was done by none other than… Dr. Widder, who also captured the first-ever footage of a live giant squid in the waters off Japan. The research cruise, entitled “Journey into Midnight: Life and Light Below the Twilight Zone,” was led by Dr. Sönke Johnsen of Duke University. Please read Sönke’s story here. Regarding DEEPEND, five of the twelve scientists onboard were DEEPENDers, including Co-PIs Tammy Frank, Heather Judkins, Heather Bracken-Grissom, Danté Fenolio, and DEEPEND Director/PI Tracey Sutton. Dr. Heather Judkins was first to identify the animal in the video as a giant squid, with this diagnosis later confirmed by DEEPEND Co-PI Dr. Michael Vecchione. Adding to the DEEPEND vibe was the fact that the cruise was conducted on the R/V Point Sur (University of Southern Mississippi, operated by LUMCON), on which all of the DEEPEND deep-trawling efforts have been based. Spectacular ship-time services, as always.
The giant squid story has been a global media sensation, featured by the NOAA Office of Exploration and Research; Discovery Channel; NY Times; Washington Post; USA Today; OCEANX; and CNN, among hundreds of others.
In addition to MEDUSA deployments, the Journey into Midnight science team had a number of other exploratory operations, including midwater trawling below 1000 m depth, ROV video transects with specimen collection, and shipboard measurements of the vision, bioluminescence, and reflectivity (color) of animals inhabiting the bathypelagic realm, earth’s largest and least-explored habitat. With respect to trawling, Dr. Sutton collected specimens for 14 ongoing projects, demonstrating the importance of sampling in addition to observation. Without such sampling, taxonomy (the science of knowing what species you are observing) would not be possible! We would instead be left wondering, “Oooh, that thing in the video looked so cool! What was it?” In total, 129 fish, 57 crustacean, and 13 squid species were collected, including many rare species, some of which we suspect are new records or new to science.
Among other scientific achievements of the cruise, Drs. Sutton and Fenolio were able to record the bioluminescence display of the Threadfin Dragonfish (Echiostoma barbatum) – something so fantastic it is hard to believe it is real. Owing to the skilled collection abilities of the ROV pilots, many specimens made it to the surface in near perfect condition, allowing for a range of high-resolution anatomical studies. With respect to vision in the midnight zone, a primary aim of the crustacean survey was to assess the ability of deep-sea shrimps to visually identify each other (i.e., conspecific recognition). Achieving this aim included measuring eye size to body length ratios across 15 species of shrimp, modeling the distances at which their bioluminescent signals remain detectable, and predicting the appearance of these signals in context of their visual acuity.
So, from all of the DEEPEND team, our deepest congratulations to Edie and Nathan! This was a testament to your hard work and ingenuity!
DEEPEND Display at the USFSP Nelson Poynter Library
On April 18th, an art exhibit was opened at the Nelson Poynter Library on the USFSP campus to highlight work that USF System researchers have been conducting related to the DWH oil spill. DEEPEND and C-Image scientists gathered with the public to discuss current findings and answer questions related to our work. It was a fantastic opportunity to share our science and link it through the arts which included twenty images taken by Dante Fenolio for the DEEPEND portion of the exhibit.